I think Menotexport is probably the best way to do this from Mendeley, but there are other options out there as well.
Exporting your references, PDFs, subfolders, and annotations is a bit more challenging, but is definitely possible. Exporting your references and PDFs might be a little more work, but shouldn’t be too difficult. There are instructions for exporting from EndNote ( here and here) and Mendeley ( here and here). Exporting your references from EndNote or Mendeley into Zotero is very easy. I used Mendeley for a couple of years before it was bought by Elsevier, who have since moved toward commercializing the software.Īs far as I know, there are three options for migrating your existing reference library over to Zotero: Many people may be in a situation where they have already invested a lot of time and money into a proprietary reference manager such as EndNote or Mendeley. Create multiple libraries that you can share with collaborators and/or the public. Search and insert references within a Word document and automatically insert a reference list in the required formatting style of virtually any journal. Extract highlighted text and annotations from PDFs and associate them with references. 
Have virtually unlimited storage for your PDFs with automatic back up.Download, rename, and organize academic papers, news articles, web sites, and other reference material with one click.The key is to use Zotero in conjunction with a cloud-based storage service. After some trial and error, I’ve settled on a system that is smooth, efficient, and free.
This tutorial is the result of a couple of years of trying different software packages and reference manager setups.
This article was originally published by Stephen Chignell on Research Gate. Photo by Jake Lorefice on Unsplash The Best Reference Manager Setup (Zotero + ZotFile + Cloud Storage)
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